Question: MULTIVARIATE GWAS METHODS
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gravatar for brendaumoh6
6 days ago by
brendaumoh60 wrote:

Does anyone know of a multivariate GWAS methods or tools that uses Gwas summary statistic data as input. If yes, please provide the necessary information about the methods,a link can help.

multivariate gwas • 70 views
ADD COMMENTlink modified 5 days ago • written 6 days ago by brendaumoh60

Thanks for your response, I have seen a method that uses summary statistics an an input data but the variable it uses doses'nt correspond with the ones on my summary statistics datasets. Is there anybody who has used MTAR before to perform GWAS analysis on using statistics.

ADD REPLYlink written 5 days ago by brendaumoh60

Please use ADD COMMENT/ADD REPLY when responding to existing posts to keep threads logically organized. This comment belongs under @Asaf's answer.

SUBMIT ANSWER is for new answers to original question.

ADD REPLYlink written 5 days ago by genomax80k
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gravatar for Asaf
6 days ago by
Asaf7.2k
Israel
Asaf7.2k wrote:

I don't know a method that does multivariate from summary statistics.

You can use GEMMA for multivariate GWAS from raw data.

You can use several methods like METASOFT to do a meta-analysis.

ADD COMMENTlink written 6 days ago by Asaf7.2k
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