bedGraphToBigWig file converter
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19 months ago
iridha • 0

Hello All,

I have MedIpP-seq replicates of same sample. I need to use plotProfile from deeptools to compare them together. for that I need to transform the bdg file generated from MACS2 to a bigwig file using bedGraphToBigWig. the bigwigs files are the input arguments for plotProfile. I do the coding Unix shell. I not able to run the bedGraphToBigWig.Would it be possibly to please give me the steps to run it in the shell?

Thanks much

bedGraphToBigWig macs2 sequence ChIP-Seq • 1.1k views
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This GitHub post might be helpful for you. https://github.com/taoliu/MACS/wiki/Build-Signal-Track

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