Hi! I am using JunctionSeq first time and not very expert in R language. While running JunctionSeq analysis I am getting an error in reading decoder file. Here is the command and error:
"#Read the decoder: decoder.file <- system.file("~/R/Splicejunction/annoFiles/decoder.bySample.txt", package="JunctionSeq"); decoder <- read.table(decoder.file, header=TRUE, stringsAsFactors=FALSE)" "Error in read.table(decoder.file, header = TRUE, stringsAsFactors = FALSE) : no lines available in input In addition: Warning message: In file(file, "rt") : file("") only supports open = "w+" and open = "w+b": using the former"
Any help is much appreciated.