Question

How To Install Seqtk Into Mac

1

Entering edit mode

12.0 years ago

tiida ▴ 10

Hi,

I'm a beginner for using terminal of MacOSX and CUI. I want to use "seqtk" for trimming of my fastq files. But I have no idea how to install the "seqtk" into my Mac. Does anyone teach me how to install and where to use it (in which directory)?

Thanks,

Tessi

• 5.0k views

ADD COMMENT • link 12.0 years ago by tiida ▴ 10

score 2 · Answer 1 · 2012-04-21

2

Entering edit mode

12.0 years ago

Istvan Albert 100k

Install the Apple Developer Tools Once that is done get the source and type make in the directory that contains seqtk.

ADD COMMENT • link 12.0 years ago by Istvan Albert 100k

0

Entering edit mode

You can also install GCC on OSX directly from github without having to waste time signing up for an Apple Developer account. See here: https://github.com/kennethreitz/osx-gcc-installer/

ADD REPLY • link 12.0 years ago by Casey Bergman 18k

score 0 · Answer 2 · 2012-04-22

0

Entering edit mode

12.0 years ago

tiida ▴ 10

Hi Istvan,

Thanks so much! Great, it works!!

Tessi

ADD COMMENT • link 12.0 years ago by tiida ▴ 10

0

Entering edit mode

HI Tessi - Please use the comment function to follow up to answers in the future.

ADD REPLY • link 12.0 years ago by Casey Bergman 18k