I am starting to work with the Affy Transcription Analysis Console (TAC) on some miRNA4.0 data. I would like to output an expression matrix after RMA normalization/summarization. of the miRNA data. I see from the old Affymetrix Expression Console that there was a way to do this:
however, the Affymetrix Expression Console has been discontinued, its functions are now included in the TAC software. However, I cannot seem to find instructions in the TAC manual for how to accomplish this process. I know that many of the downstream analysis tools are included in the TAC software but I NEED to extract this expression matrix for use elsewhere.
Has anyone had success in doing this? Thanks!