Reference Transcriptome From A Mouse
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9.6 years ago
lsvijfhuizen ▴ 90

Dear All,

I was wondering if someone knows where i can find an up-to-date reference transcriptome from a mouse (version mm9). It would be nice if there is one available in a FASTA format!

Thank you!

transcriptome reference mouse fasta • 9.7k views
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9.6 years ago

This is available through the Ensembl BioMart tool, where you can ask for all Mouse transcripts in FASTA format :

http://www.ensembl.org/biomart/martview

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9.6 years ago
Sudeep ★ 1.7k

You can download mm9 (or NCBI build 37, according to UCSC) RNA fasta files from NCBI FTP archive folder

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