CNVRs visualization with karyoploteR
0
0
Entering edit mode
2.4 years ago
rthapa ▴ 60

Hi,

I am using karyoploteR to visualize CNV. I am getting following error. But I do have the genomic region in a bed file. Could anyone provide a suggestion what might have gone wrong?

Error in plotKaryotype(zoom = "Chr01:3647-12170735", main = "BedGraphs", : You are trying to set the zoom to a region not part of the current genome. In addition: Warning message: In .Seqinfo.mergexy(x, y) : The 2 combined objects have no sequence levels in common. (Use suppressWarnings() to suppress this warning.)

cnv • 507 views
ADD COMMENT

Login before adding your answer.

Traffic: 836 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6