Question: Error in running PfamScan: Can't locate Bio/Pfam/Scan/PfamScan.pm in @INC
0
gravatar for basusudipto92
11 weeks ago by
basusudipto920 wrote:

Hi everyone,

I am not being able to run PfamScan in my pc. Everytime it pops up with this error.

$perl pfam_scan.pl

Can't locate Bio/Pfam/Scan/PfamScan.pm in @INC (you may need to install the Bio::Pfam::Scan::PfamScan module) (@INC contains: /home/pampa/Desktop/Papai/Pfam/PfamScan /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.26.1 /usr/local/share/perl/5.26.1 /usr/lib/x86_64-linux-gnu/perl5/5.26 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.26 /usr/share/perl/5.26 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at pfam_scan.pl line 10. BEGIN failed--compilation aborted at pfam_scan.pl line 10.

Can anyone guide me with this?

pfamscan pfam software error • 194 views
ADD COMMENTlink written 11 weeks ago by basusudipto920

How did you install it?

ADD REPLYlink written 11 weeks ago by Asaf8.3k

I followed the steps as instructed in the Readme file.

ADD REPLYlink written 11 weeks ago by basusudipto920

It wasn't installed properly or your paths are defined properly.

ADD REPLYlink written 11 weeks ago by Asaf8.3k
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