Hello, what is the easiest way of mapping uniprot records into genomic coordinates (eg. hg19)? Preferably using R+bioconductor.
I just tried to do so using knownGene table (giving exon and cds positions) from uscs mysql database but this is not the way. - uniprot IDs are sometimes assigned to more exon sets (Q00987=MDM2 ) and calculated protein lengths tend to differ by a couple of AKs from uniprot records.
Thank you for your suggestions