Hi all, I have analyzied my RNA-Seq data. I have used this tools: Download sequences(SRA) from ncbi database. FastQC (Check quality of sequencing). Trimmomatic(the quality of each raw library is analyzed and sequencing adapters and bad quality reads are removed) I have used paired end datas as input in hisat. I had htseq count. I have used deseq2 package in galaxy to get up and dawn genes. now i dont know how can i get novel lncRNAs?
Need help Thank you in advance