How to convert 10X single nuclear RNA Seq bam file to fastq?
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20 months ago
Researcher ▴ 70

Hi All, I have 10X single-nuclear RNA Seq bam files and want to convert these to fastq files. I am not sure how can we do this? Will this be similarly treated as we handle scRNA Seq bam files using bamtofastq?

Thanks

10x Genomics bamtofastq cellranger snRNA • 846 views
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Entering edit mode
20 months ago
GenoMax 111k

Sure. Start with bamtofastq provided by 10x here.

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