Question: Igv Genome Viewer: Problems While Loading Dgv Track
0
gravatar for romsen
7.9 years ago by
romsen60
romsen60 wrote:

Hello,

I have problems loading the DGV track in the IGV Genome Browser. It doesn't work. By clicking
File - Loading from Server - Annotations (hg18) - Variation and Repeats - Genomic Structural Variation (DGV) the track should be loaded. But an error occur.

http://www.freeimagehosting.net/newuploads/ywnr1.jpg

Therefore I load the CNV track from the UCSC-DAS Server with the URL: http://genome.ucsc.edu/cgi-bin/das/hg18/features?type=dgv

But unfortunatly the information and color code is missing for gains and losses.

Perhaps you have an idea to solve this problem. It would be very nice to have this color code: Brown, blue and red for gain/loss, gain and loss of sequence.

Thank you!

cnv igv • 2.3k views
ADD COMMENTlink modified 7.9 years ago by Echo40 • written 7.9 years ago by romsen60
0
gravatar for Echo
7.9 years ago by
Echo40
Echo40 wrote:

Does this kind of file needed to be indexed before loading into the IGV?

ADD COMMENTlink modified 7.9 years ago • written 7.9 years ago by Echo40
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