Consensus sequence of two genomes

Question

[RiccPicc]

Hi everyone.

I have two genomes assembled from two different reads datasets of the same species. I would like to have a consensus sequence of these two genomes. Genomes lenght are about 500Mb. Can someone help me?

Thank you!

[Joe]

How are you going to define a consensus with only 2 genomes?

Answer 1

[GenoMax]

You are looking for assembly reconciliation tools. Here is a comparison of some tools.

[RiccPicc]

Thank you, that's what I was looking for!