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3.9 years ago
SurdanBurasi
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0
Hello. I have a metagenome study. What do I have to do to identify the bacterial species in this bacterial cluster. Sequencing data was generated using fastq format 16S rRNA genes.
What have done so far? What is fastS format?
it can't be fastS that I wrote wrong. the right one is FASTQ.I am so sorry :(( I actively annotate new generation sequencing data. But I will work for the first time in the field of metagenomes.
Have you gone through online materials that are available. There are so many bioinformatics analysis guides available. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2593568/, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3351745/, https://www.researchgate.net/post/can_someone_guide_me_in_processing_the_metagenomic_16s_rRNA_data_which_is_in_fastq_format
You should atleast make an effort first.
check mothur and/or qiime tutorials.