I'm looking for a solution to download or save the sample table similar to the GEO2R for a GEO dataset.
Here is an example: https://www.ncbi.nlm.nih.gov/geo/geo2r/?acc=GSE14468
I can use GEOquery package in R to do that.
gse <- getGEO("GSE14468", destdir = getwd())
phenoData <- (pData(gse[[1]]))
But with this, I have more than 70 columns with some same information and its a long list to choose from. Please suggest me a solution. Thank you.