I'm a wet lab Molecular Biologist who has experience with programming in Python and R, and I also know how to use bash. However, I'm a newbie in RNA seq data analysis, and I just read and coded through a few tutorials here and there.
Right now, I need to work on miRNA-mRNA negative correlation analysis, and I'm searching to find a code template or pipeline to use as my starting points instead of writing everything from scratch.
I also need a step by step tutorial, preferably in Jupyter notebook format, to learn the why behind different stages of differential analysis, enrichment analysis, and correlation analysis.
I appreciate your help