Hi! I'm doing a bacteria pan-genome research, which involves thousands of genomes. I'm trying to assign every protein in all the genome to pfam. I know there are tools like NCBI cdd database, but I don't know how to do scripted search, since you can only search 4000 proteins at one time on the website. I wonder if there is a R package to do this job, or any other convenient methods?
Question: How to assign massive amount of protein to pfam using R
4 months ago by
zhangchi2015012290 • 0 wrote:
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