Entering edit mode
3.8 years ago
Vignesh
•
0
Here is an example of the header from the FASTA file
>PSR83604 cdna supercontig:Red5_PS1_1.69.0:ps1sf1427:11608:20559:-1 gene:CEY00_Acc33586 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine-rich receptor-like protein kinase
I want to keep just the 'description' part which contains the protein name and remove rest of them from the header.
I tried using 'sed', but I'm going wrong somewhere.
Can someone help?
Thank you in advance..
Thank you very much. I already tried some of the solutions mentioned in Biostars. But still it didn't work. That's why I decided to post up a separate question. I'll look into it more.
Is never a good description of the problem. You need to be specific as to what did not work.