Entrez e-utils reference for ensembl ids
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16 months ago
mk ▴ 230

I know this is a long shot, but assuming my access to services is limited to e-utils, is there any way to map ensemble gene ids like ENSG00000010404 ( iduronate 2-sulfatase) to Entrez Gene UIDs e.g "3423" ?

ensembl entrez e-utils gene • 389 views
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16 months ago
GenoMax 108k

Using EntrezDirect:

$ esearch -db gene -query ENSG00000010404 | esummary | xtract -pattern DocumentSummary -element Id,Description
3423    iduronate 2-sulfatase
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awesome, didn't know that ENSG ids were accepted

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16 months ago
khorms ▴ 210

Can't you just download biomaRt tables and use them to look up the correspondence like it's done here?

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