Question: GO Enrichment DAVID/Panther
gravatar for Ksandersen
4 months ago by
Ksandersen10 wrote:

Hello All

I'm presently trying to perform GO-term enrichment analysis on some variable genes that I have identified. I want to perform a GO-term enrichment analysis in DAVID and in Panther, to explore the different out-puts from both programs.

Where I get confused is that Panther has two GO-Term levels one called GO-slim biological processes and another called GO biological process complete. Whereas, DAVID has GOTERM_BP_1-5, GOTERM_BP_Direct, GOTERM_BP_All and GOTERM_BP_FAT.

My question is rather any of the Panther terms corresponds to the DAVID terms. I'm thinking that the Panther GO biological process complete could corresponds to DAVID GOTERM_BP_All term, however, I dont know..

I hope my question makes sense.

Best Regards Kristian

rna-seq gene • 268 views
ADD COMMENTlink modified 5 weeks ago by Biostar ♦♦ 20 • written 4 months ago by Ksandersen10
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