Calculating Effective Population Size from One Individual
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4.4 years ago
jsweet6 • 0

Hi,

I am looking to calculate effective population size from SNP data called from next generation sequencing in vcf/Plink format. I have tried but cannot seem to find any programme that will allow you to work on one individual. Could someone point me in the direction of a programme that allows this?

Thank you

Ne SNP • 884 views
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psmc seems to do that https://github.com/lh3/psmc

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