Entering edit mode
3.8 years ago
Hi everyone,
I downloaded many TCGA and GTEX bulk RNA-Seq samples. On GDC, I was able to find lots of data about the patients. However, I'm trying to rule out a batch effect. So I'm trying to find: 1. the date that the RNA-Seq was performed and 2. the center at which RNA-Seq was performed. I think this is different than the Tissue Source Sites.
I also don't have access to the BAM files or FASTQ files, as I'm not part of an institution.
I think this should be located in one of the many, many fields of information on GDC. If anyone has any thoughts on this, it would be much appreciated!
Thank you!
Add a custom filter, and search for "center" Add Customized Filters in GDC