Question: Divide And Conquer Approach For Sequence Assembly
0
gravatar for Monzoor
3.3 years ago by
Monzoor280
Monzoor280 wrote:

Is anyone aware of approaches that have used a divide and conquer strategy to reduce the search space (and related noise) for sequence assembly programs ?

Does this "divide and conquer" strategy really payoff in terms of time and efficiency ?

ADD COMMENTlink modified 3.0 years ago by Spitshine560 • written 3.3 years ago by Monzoor280
2
gravatar for Spitshine
3.3 years ago by
Spitshine560
Esch-sur-Alzette, Luxembourg
Spitshine560 wrote:

Depending on your definition of divide-conquer: Don't all assemblers use it?

ADD COMMENTlink written 3.3 years ago by Spitshine560

Im not sure that all programs use this strategy. I guess my question was not that clear.

ADD REPLYlink written 3.3 years ago by Monzoor280
1
gravatar for Rm
3.3 years ago by
Rm6.5k
US
Rm6.5k wrote:

If I am not wrong..."CAP3" assembly Program uses divide–conquer technique...

A divide-and-conquer approach to fragment assembly.

Otu HH, Sayood K.

ADD COMMENTlink written 3.3 years ago by Rm6.5k
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