SNPRelate for population structure for GWAS SNP data
0
0
Entering edit mode
3.8 years ago
evelyn ▴ 230

Hello,

I want to correct GWAS SNP data for population structure using SNPRelate software. I have SNPs stored in text files for multiple samples. I have SNP information for each chromosome in one text file. So I have 20 text files in total. A line from text files looks like:

TM2ch01 11280   - A A - - A - - A - - A - A A C - A M A A - A A A A A A - A A A - A - A A A A A A - A A A - A - M - A A - A

I want to convert it to GDS file. I am new to this. I appreciate any help. Thank you!

SNP • 575 views
ADD COMMENT

Login before adding your answer.

Traffic: 2431 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6