Hello everyone, I'm trying to align two sequences with EMBOSS needle (global alignment). Specifically, they are the genomes of Sars-CoV-2, but one of the sequences (MT259240) doesn't have certain regions (the non-coding regions like 5'UTR and 3'UTR), so, I suspect that the alignment may be not quite right. Namely, the first non-coding region of the first sequence (NC_045512 the referent sequence) is being aligned with the first gene of the other sequence (ORF1ab gene). Is this incorrect and if so how would I correct the mistake? Thanks in advance.
Question: Aligning two genomes
4 months ago by
Nicolas Carter • 10
Nicolas Carter • 10 wrote:
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