How To Use Rsem With Soapdenovo-Trans
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Entering edit mode
11.9 years ago
Rm 8.3k

I am new to use Rsem; does any one attempted using RSEM for SOAPdenovo-Trans contigs/scaffolds for differential expression of transcripts from genome without reference?.
How to integrate them?

I am trying trinity ...but it is taking for ever....

trinity rna-seq • 2.9k views
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Entering edit mode
8.2 years ago
kanika.151 ▴ 130

How about Salmon and Kallisto?

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