Closed:Whole genome genotyping
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3.8 years ago
zpl015 • 0

Hello,

I am trying to do whole genome (or a subset) genotyping for an individual in order to find out the heterozygous loci.

I know genotyping is typically only done for sites where a variation is discovered, but in my case, the individual is the reference individual so it has no difference to itself. I was wondering if there is any genotyping tool that does not involve variant calling?

I have the genome assembly for the individual.

Any help would be greatly appreciated!

Zoe

genotyping NGS • 146 views
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