MG RAST for Eukaryota
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Entering edit mode
23 months ago
TomM • 0

Hi

I have a metagenome dataset containing mostly Eukaryota. I know that MG-RAST is not capable of accurately predicting eukaryote genes, but I performed prediction with a separate tool (MetaEuk) and now have all the protein sequences. Can MG-RAST handle these and give reliable KEGG annotations?

Thanks!

MG-RAST Eukaryota metagenomics functions KEGG • 760 views
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Entering edit mode
5 weeks ago

Hi Tom,

Yes, you can go with the predicted proteins for the annotation/downstream analysis.

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