Question: How Can I Verify If My Chip-Seq Control/Input Data Is Enough Covered By Sequencing Tags?
1
gravatar for Luke
5.6 years ago by
Luke220
Turin, Italy
Luke220 wrote:

Hi Dears, as written in the title, do you know any software/tool to test if my control/input data is sufficiently covered by sequencing and if the distribution of tags is similar to an uniform distribution? Thank you. Best regards, Luke

software chip-seq • 944 views
ADD COMMENTlink modified 4 months ago by Biostar ♦♦ 20 • written 5.6 years ago by Luke220
1
gravatar for Ian
5.6 years ago by
Ian5.0k
University of Manchester, UK
Ian5.0k wrote:

HOMER (Perl) and htSeqTools (R) are useful tools that may answer you questions, but are certainly good at performing QC on your samples.

ADD COMMENTlink written 5.6 years ago by Ian5.0k
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