Ribo-seq data analysis using an RNA-Seq analysis pipeline
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2.1 years ago
ATCG ▴ 370

Hi, Anyone familiar with Ribo-Seq analysis, Is it possible to apply an RNA-Seq pipeline to Ribo-Seq and TRAP-Seq data? Thanks!

RNA-Seq Ribo-Seq TRAP-Seq • 634 views
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Entering edit mode
2.1 years ago

I'm not an expert in Ribo-seq but I don't think you can directly use an RNASeq pipeline as there are many QC steps you want to consider when handling Ribo-seq data (codon frequency etc). Have you looked at some ribo-seq pipelines?

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