Dear Biostar Users,
I would like to generate phylogenetic tree from ~1000 bacterial genomes. For this purpose i would like to extact highly conserved 16S rRNA region of these genomes.
The information I have is something like below, where I have genome name and NC id.
Acaryochloris marina MBIC11017, NC_009925
Is there any way to perform automated extaction of 16S conserved region for these ~1000 genomes.
Looking forward for a solution.