I'm having difficulties to get a plot with a readable scale.
I have plotted transcriptomic data using R with package EMA. However 'genes names' (ordinate axis) are written too big and I can't see all gene names. I would like to have one gene name per compartment.
Here is my code:
clustering.plot(tree= c.sample, tree.sup=c.gene, data=tpm.100, dendro=TRUE, dendro.sup=TRUE, names=TRUE, names.sup=TRUE, names.dist=TRUE, trim.heatmap=0.99) clustering.plot(tree= c.sample, tree.sup=c.gene, data=tpm.100, legend=FALSE, legend.pos="bottomright", dendro=FALSE, dendro.sup=FALSE,names.sup=TRUE, names.dist=TRUE,trim.heatmap=0.99)
I have read EMA package documentation to play with different options without success.
I'm new with R, there should be some obvious things i'm missing
Thank you for your help