I have identified 5 different cell types from a single cell cluster, we have also identified a number of cells present in each condition(i.e. in Normal and Tumor clusters). I wanted to conduct statistical testing of differences in Gini coefficients between tumour and non-malignant compartments across all phenotypic clusters using exact permutation testing. I am unable to conduct this test, Please help me in conducting this test on my cell types. how best i can do this? i am very confused.
Thanks a lot for your kind help.
Stay safe, Dave.