Question: Error related to DESeq2 package
0
gravatar for ravi.dhiman2403
5 weeks ago by
ravi.dhiman24030 wrote:
Error in DESeqDataSetFromMatrix(countData = just.raw.counts, colData = meta.data,  :    could not find function "DESeqDataSetFromMatrix"
rna-seq tutorial • 152 views
ADD COMMENTlink modified 5 weeks ago by mo.ghasemi71710 • written 5 weeks ago by ravi.dhiman24030

Please post complete set of commands. Posting a standalone error provides no context.

Are you loading DESeq2 library?

ADD REPLYlink modified 5 weeks ago • written 5 weeks ago by genomax89k
0
gravatar for h.mon
5 weeks ago by
h.mon31k
Brazil
h.mon31k wrote:

The exact same question has been asked before: DESeq2 "DESeqDataSetFromMatrix" error

I am pretty sure the solution there will work for you also.

Read the question carefully, as it is a very good example on how to ask good questions: it includes a lot of detail, shows the commands used, and - in the case of R questions - includes the output of sessionInfo().

ADD COMMENTlink written 5 weeks ago by h.mon31k
0
gravatar for mo.ghasemi717
5 weeks ago by
mo.ghasemi71710 wrote:

you should load deseq2 library

ADD COMMENTlink written 5 weeks ago by mo.ghasemi71710
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