Question: Sleuth Table - identical q-values
gravatar for arussell3483
3 months ago by
arussell348320 wrote:


I have finished running kallisto and am working on running sleuth with my dataset. I have completed the initial walkthrough (as can be seen here: successfully. My own dataset is very similar to this sample set, with 12 samples and 2 conditions. I can run through sleuth with my dataset, but the output is not what I expected. I have 21,985 transcripts, but the q-values are repeating. For example, very large groups (100+) of transcripts will all have the same q-value. As far as I can tell, this is occurring throughout all 21,985 transcripts. Has anyone else run into this problem?

Thank you!

ADD COMMENTlink written 3 months ago by arussell348320
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 983 users visited in the last hour