to identify target genes of miRNAs using psRNATarget
0
0
Entering edit mode
7 months ago

Hi every one,

I am going to predict the target genes of miRNAs using psRNATarget. I am using a genome assembly consisting of long contigs as the scaffold and there isn't any GFF3 file for my plant species. The problem is that when the contigs, identified by psRNATarget, are subjected to BLASTX, a lot of genes are found. Could you please guide me on how I can identify the right target genes of my miRNAs? I am so thankful to let me know if you have any recommendations.

Best regards, Mina

RNA-Seq • 180 views
ADD COMMENT

Login before adding your answer.

Traffic: 1895 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6