Question: (Closed) RNA-Seq and no of reads
gravatar for mdfardin374
6 months ago by
mdfardin37410 wrote:

Hello all, I have a peptide and I want to find whether this peptide has an expression in RNA-Seq data basically, I want to know the no of reads this peptide map to

sequencing rna-seq • 253 views
ADD COMMENTlink modified 4 months ago by Biostar ♦♦ 20 • written 6 months ago by mdfardin37410

Have you already mapped and annotated your RNA-Seq data? If so, grep (in bash or R) the name of your peptide and you will get that.

ADD REPLYlink written 5 months ago by jperezboza20

Hello mdfardin374!

We believe that this post does not fit the main topic of this site.

OP did not follow-up. Please comment if this is still of interest.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.


ADD REPLYlink written 4 months ago by ATpoint46k
Please log in to add an answer.
The thread is closed. No new answers may be added.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2251 users visited in the last hour