Ideogram Mapview Data For Human Genome Build 37.2
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10.8 years ago
Alex ★ 1.5k

I can't find ideogram file (positions of cytogenetics bands) in the new build of Homo sapiens genome (Build 37.2). In the build 37.1 ideogram file is placed in mapview/ideogram.gz

  1. Can I use the ideogram file from 37.1 with build 37.2?
  2. What is difference with beetween ideogram.gz and ideogram9606GCF000001305.13XXX files in build 37.1?
human • 3.4k views
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10.8 years ago

You can get these data from the UCSC GRCh37/hg19 Human Genome Database or Browser:

http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz

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Thanks, ideorgram is now correct with UCSC data. 37.2 build has shorter chromosomes.

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Thanks, ideorgram is now correct with UCSC data.

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