Color code samples
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12 months ago
roberts ▴ 40

Hello, I have a merged seurat object with 3 different samples in it. How would I do about color coding for sample type. For example I want a umap where each of the 3 samples have its own color so you can see overlap/lack of overlap. Thank you!

Seurat R RNA-Seq • 408 views
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Can you make the question more clear?

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Have you even looked at a vignette? Or looked at what different options do for dimPlot?

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In particular, the group.by parameter.