Off topic:Top 10 clonotype frequency
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9 months ago
roberts ▴ 40

Hello I am using

top10_clonotype <- table(AD007S$clonotype_id)
top10_clonotype <- as.data.frame(top10_clonotype)
top10_clonotype <- slice_max(top10_clonotype, order_by = top10$freq, n=11)

I am trying to pick out the top 10 most frequent clonotypes in my object. This code was working before but now I keep getting the warning -

in order(x, decreasing = TRUE) : argument 1 is not a vector
In addition: Warning message:
Unknown or uninitialised column: `freq`.

Any suggestions?

R Seurat 10X • 224 views
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