Kraken2 Error in buildind NCBI bacterial database
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12 months ago
MSRS ▴ 510

Hi,

I am trying to build an NCBI RefSeq database of bacteria with Kraken2

kraken2-build --download-library bacteria --db bacteria

Error messages

rsync_from_ncbi.pl: unexpected FTP path (new server?) for na

Any solution? Thanks in advance.

sequencing NCBI RefSeq • 1.4k views
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12 months ago
Medhat 9.0k

Similar issue here -> https://github.com/DerrickWood/kraken/issues/114#issuecomment-610912961. Maybe it will help.

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Thank you Medhat, It works.

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Right, it looks like @shaminur has an old version, thanks igor.

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