What does MapInfo mean in HumanMethylation 450 chip?
0
0
Entering edit mode
3.5 years ago
860101959 ▴ 10

Recently I used TCGA database Methy450 to select differential methylation sites between cancers.

I got results like this;

cgIDs   Fold_Change     Genome_Build    CHR     MAPINFO UCSC_CpG_Islands_Name

cg00890041      20.186885601531078      37.0    6       31830570.0      chr6:31830299-31830948

For each CpG Sites, HumanMethylation chip supplies MAPINFO and USCS_Islands_Name information etc. . I am wondering the methylation expression values is corresponding to location of MAPINFO or region of UCSC_CpG_Islands_Name?

Thanks!

sequencing next-gen • 592 views
ADD COMMENT

Login before adding your answer.

Traffic: 1951 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6