Downloading promoter sequences from UCSC in bed format

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Question: Downloading promoter sequences from UCSC in bed format

0

3 months ago by

Jamie Watson • 0

Jamie Watson • 0 wrote:

Hi,

I need to get promoter coordinates in human genome from hg19 assembly. I have used UCSC table browser to obtain these promoters. However, the bed file I got only had 3 columns. How can I get 9 additional column too as mentioned here:

http://genome.ucsc.edu/FAQ/FAQformat.html#format1

assembly genomics bioinformatics gene • 167 views

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written 3 months ago by Jamie Watson • 0

1

3 months ago by

GenoMax ♦ 94k

United States

GenoMax ♦ 94k wrote:

BED format requires only first three columns. So the file you got is in proper BED format.

ADD COMMENT • link written 3 months ago by GenoMax ♦ 94k

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