What format should a dataframe be in to use the AddMetaData function in Seurat?
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2.1 years ago
Pratik ▴ 850

I've been having trouble with this.

I can directly cbind the dataframe to Seurat using the commands in this post:

C: How to embed known cell information into Seurat object? AddMetaData?

However, I want to use the built in Seurat function AddMetaData.

Any clues?

seurat R RNA-Seq rna-seq scRNA-seq • 895 views
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Entering edit mode
17 months ago
Pratik ▴ 850

I figure it out months later. The answer is here:

How to read a dataframe into Seurat for AddMetaData properly?

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