Hello, I am new to bioinformatics, and I am trying to do DEG analysis using DESeq2. I followed the DESeq2 vignette, and I did this
res <- results(dds, lfcThreshold = log2(2), alpha = 0.05)
summary(res) out of 17813 with nonzero total read count. adjusted p-value < 0.05 LFC > 1.00 (up) : 78, 0.44% LFC < -1.00 (down) : 106, 0.6% outliers  : 0, 0% low counts  : 2073, 12% (mean count < 7)  see 'cooksCutoff' argument of ?results  see 'independentFiltering' argument of ?results
So, my question is, how do I get my up-regulated and down-regulated genes from this output? I am setting my log2fc=1 for the cutoff threshold. I also read this thread, but I still could not find the answer I am looking for. Thank you very much.