Closed:Should discodant alignments be retained in ChIP-Seq experiments?
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3.5 years ago
Aspire ▴ 300

In some online tutorials for ChIP-Seq (1,2) after aligning, non-unique reads are filtered out. However, discordant alignments are not.

Is it standard practice, and why, if so?
ChIP-Seq • 146 views
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