Entering edit mode
3.5 years ago
yamasakih
•
0
I am learning how to calculate CAI and how to implement it in Biopython.
I don't know why cai_for_gene method in CodonAdaptationIndex class subtracts 1 when calculating CAI.
Can someone please tell me why?
Thank you.
https://github.com/biopython/biopython/blob/master/Bio/SeqUtils/CodonUsage.py#L157
Biopython: version 1.78