Is it possible to look at gene-level expression using DEXseq?
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3.5 years ago
dan • 0

I am using the data from dexseq_count.py to look at differential exon usage and was wondering if there was a way I could look at differential gene expression using the same data?

Thank you!

RNA-Seq DEXseq • 476 views
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I would simply use featureCounts to produce a count matrix from my BAM files which then can go into DESeq2 (or any other gene level framework).

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