Entering edit mode
3.5 years ago
dan
•
0
I am using the data from dexseq_count.py to look at differential exon usage and was wondering if there was a way I could look at differential gene expression using the same data?
Thank you!
I would simply use
featureCounts
to produce a count matrix from my BAM files which then can go into DESeq2 (or any other gene level framework).