Way to check if gene A lies in the same ORF as gene B

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3.5 years ago

Xylanaser ▴ 80

Hey i wonder how to quickly check if gene A lies in the same open reading frame as gene B

best

X

gene protein ORF • 1.0k views

ADD COMMENT • link 3.5 years ago by Xylanaser ▴ 80

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Hi! Could you provide an example?

ADD REPLY • link 3.5 years ago by Fatima ▴ 1000

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Open reading frames are part of genes, not vice-versa. You cannot have two genes that are part of the same ORF.

Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

ADD REPLY • link 3.5 years ago by i.sudbery 19k

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Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

yes.

ADD REPLY • link 3.5 years ago by Xylanaser ▴ 80

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Which organism? What annotation? Are these ORFs on the same or different transcripts?

ADD REPLY • link 3.5 years ago by i.sudbery 19k

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