Question: Way to check if gene A lies in the same ORF as gene B
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gravatar for Xylanaser
5 weeks ago by
Xylanaser60
Poland - Warsaw - SGGW/WULS
Xylanaser60 wrote:

Hey i wonder how to quickly check if gene A lies in the same open reading frame as gene B

best

X

protein orf gene • 128 views
ADD COMMENTlink modified 5 weeks ago • written 5 weeks ago by Xylanaser60

Hi! Could you provide an example?

ADD REPLYlink written 5 weeks ago by Fatima830

Open reading frames are part of genes, not vice-versa. You cannot have two genes that are part of the same ORF.

Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

ADD REPLYlink written 5 weeks ago by i.sudbery9.8k

Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

yes.

ADD REPLYlink written 5 weeks ago by Xylanaser60

Which organism? What annotation? Are these ORFs on the same or different transcripts?

ADD REPLYlink written 5 weeks ago by i.sudbery9.8k
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