thank you for taking the time to view my post. I was wondering if there are any mapped files available that contain all the GO codes associated with a given NCBI gi number?
Many thanks for your time
and the REAME about it:
This file reports the GO terms that have been associated
with Genes in Entrez Gene.
It is generated by processing the gene_association files
on the GO ftp site:
and comparing the DB_Object_ID to annotation in Gene,
as also reported in gene_info.gz .....
If you really want to have that "table", I guess you need find "gene2gi" table which is a multiple to multiple relationship database.
Or you can refer the work done by blast2go.org
Have a look at the SwissProt flatfile. It contains both GO(s) and GI for a given protein.
Please add a link to the file / data.
Thank you, yes this is true however, this only appears to be true for the annotated database. This does seem to be the best I can find in terms of a flat file.
Jingtao09 seems to have an interesting solution. I will look into this.
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